"""Module contains logic for indexing documents into vector stores."""from__future__importannotationsimporthashlibimportjsonimportuuidfromitertoolsimportislicefromtypingimport(Any,AsyncIterable,AsyncIterator,Callable,Dict,Iterable,Iterator,List,Literal,Optional,Sequence,Set,TypedDict,TypeVar,Union,cast,)fromlangchain_core.document_loaders.baseimportBaseLoaderfromlangchain_core.documentsimportDocumentfromlangchain_core.indexing.baseimportDocumentIndex,RecordManagerfromlangchain_core.pydantic_v1importroot_validatorfromlangchain_core.vectorstoresimportVectorStore# Magic UUID to use as a namespace for hashing.# Used to try and generate a unique UUID for each document# from hashing the document content and metadata.NAMESPACE_UUID=uuid.UUID(int=1984)T=TypeVar("T")def_hash_string_to_uuid(input_string:str)->uuid.UUID:"""Hashes a string and returns the corresponding UUID."""hash_value=hashlib.sha1(input_string.encode("utf-8")).hexdigest()returnuuid.uuid5(NAMESPACE_UUID,hash_value)def_hash_nested_dict_to_uuid(data:dict[Any,Any])->uuid.UUID:"""Hashes a nested dictionary and returns the corresponding UUID."""serialized_data=json.dumps(data,sort_keys=True)hash_value=hashlib.sha1(serialized_data.encode("utf-8")).hexdigest()returnuuid.uuid5(NAMESPACE_UUID,hash_value)class_HashedDocument(Document):"""A hashed document with a unique ID."""uid:strhash_:str"""The hash of the document including content and metadata."""content_hash:str"""The hash of the document content."""metadata_hash:str"""The hash of the document metadata."""@classmethoddefis_lc_serializable(cls)->bool:returnFalse@root_validator(pre=True)defcalculate_hashes(cls,values:Dict[str,Any])->Dict[str,Any]:"""Root validator to calculate content and metadata hash."""content=values.get("page_content","")metadata=values.get("metadata",{})forbidden_keys=("hash_","content_hash","metadata_hash")forkeyinforbidden_keys:ifkeyinmetadata:raiseValueError(f"Metadata cannot contain key {key} as it "f"is reserved for internal use.")content_hash=str(_hash_string_to_uuid(content))try:metadata_hash=str(_hash_nested_dict_to_uuid(metadata))exceptExceptionase:raiseValueError(f"Failed to hash metadata: {e}. "f"Please use a dict that can be serialized using json.")fromevalues["content_hash"]=content_hashvalues["metadata_hash"]=metadata_hashvalues["hash_"]=str(_hash_string_to_uuid(content_hash+metadata_hash))_uid=values.get("uid",None)if_uidisNone:values["uid"]=values["hash_"]returnvaluesdefto_document(self)->Document:"""Return a Document object."""returnDocument(id=self.uid,page_content=self.page_content,metadata=self.metadata,)@classmethoddeffrom_document(cls,document:Document,*,uid:Optional[str]=None)->_HashedDocument:"""Create a HashedDocument from a Document."""returncls(# type: ignore[call-arg]uid=uid,# type: ignore[arg-type]page_content=document.page_content,metadata=document.metadata,)def_batch(size:int,iterable:Iterable[T])->Iterator[List[T]]:"""Utility batching function."""it=iter(iterable)whileTrue:chunk=list(islice(it,size))ifnotchunk:returnyieldchunkasyncdef_abatch(size:int,iterable:AsyncIterable[T])->AsyncIterator[List[T]]:"""Utility batching function."""batch:List[T]=[]asyncforelementiniterable:iflen(batch)<size:batch.append(element)iflen(batch)>=size:yieldbatchbatch=[]ifbatch:yieldbatchdef_get_source_id_assigner(source_id_key:Union[str,Callable[[Document],str],None],)->Callable[[Document],Union[str,None]]:"""Get the source id from the document."""ifsource_id_keyisNone:returnlambdadoc:Noneelifisinstance(source_id_key,str):returnlambdadoc:doc.metadata[source_id_key]elifcallable(source_id_key):returnsource_id_keyelse:raiseValueError(f"source_id_key should be either None, a string or a callable. "f"Got {source_id_key} of type {type(source_id_key)}.")def_deduplicate_in_order(hashed_documents:Iterable[_HashedDocument],)->Iterator[_HashedDocument]:"""Deduplicate a list of hashed documents while preserving order."""seen:Set[str]=set()forhashed_docinhashed_documents:ifhashed_doc.hash_notinseen:seen.add(hashed_doc.hash_)yieldhashed_doc# PUBLIC API
[docs]classIndexingResult(TypedDict):"""Return a detailed a breakdown of the result of the indexing operation."""num_added:int"""Number of added documents."""num_updated:int"""Number of updated documents because they were not up to date."""num_deleted:int"""Number of deleted documents."""num_skipped:int"""Number of skipped documents because they were already up to date."""
[docs]defindex(docs_source:Union[BaseLoader,Iterable[Document]],record_manager:RecordManager,vector_store:Union[VectorStore,DocumentIndex],*,batch_size:int=100,cleanup:Literal["incremental","full",None]=None,source_id_key:Union[str,Callable[[Document],str],None]=None,cleanup_batch_size:int=1_000,force_update:bool=False,)->IndexingResult:"""Index data from the loader into the vector store. Indexing functionality uses a manager to keep track of which documents are in the vector store. This allows us to keep track of which documents were updated, and which documents were deleted, which documents should be skipped. For the time being, documents are indexed using their hashes, and users are not able to specify the uid of the document. IMPORTANT: * if auto_cleanup is set to True, the loader should be returning the entire dataset, and not just a subset of the dataset. Otherwise, the auto_cleanup will remove documents that it is not supposed to. * In incremental mode, if documents associated with a particular source id appear across different batches, the indexing API will do some redundant work. This will still result in the correct end state of the index, but will unfortunately not be 100% efficient. For example, if a given document is split into 15 chunks, and we index them using a batch size of 5, we'll have 3 batches all with the same source id. In general, to avoid doing too much redundant work select as big a batch size as possible. Args: docs_source: Data loader or iterable of documents to index. record_manager: Timestamped set to keep track of which documents were updated. vector_store: VectorStore or DocumentIndex to index the documents into. batch_size: Batch size to use when indexing. Default is 100. cleanup: How to handle clean up of documents. Default is None. - Incremental: Cleans up all documents that haven't been updated AND that are associated with source ids that were seen during indexing. Clean up is done continuously during indexing helping to minimize the probability of users seeing duplicated content. - Full: Delete all documents that have not been returned by the loader during this run of indexing. Clean up runs after all documents have been indexed. This means that users may see duplicated content during indexing. - None: Do not delete any documents. source_id_key: Optional key that helps identify the original source of the document. Default is None. cleanup_batch_size: Batch size to use when cleaning up documents. Default is 1_000. force_update: Force update documents even if they are present in the record manager. Useful if you are re-indexing with updated embeddings. Default is False. Returns: Indexing result which contains information about how many documents were added, updated, deleted, or skipped. Raises: ValueError: If cleanup mode is not one of 'incremental', 'full' or None ValueError: If cleanup mode is incremental and source_id_key is None. ValueError: If vectorstore does not have "delete" and "add_documents" required methods. ValueError: If source_id_key is not None, but is not a string or callable. """ifcleanupnotin{"incremental","full",None}:raiseValueError(f"cleanup should be one of 'incremental', 'full' or None. "f"Got {cleanup}.")ifcleanup=="incremental"andsource_id_keyisNone:raiseValueError("Source id key is required when cleanup mode is incremental.")destination=vector_store# Renaming internally for clarity# If it's a vectorstore, let's check if it has the required methods.ifisinstance(destination,VectorStore):# Check that the Vectorstore has required methods implementedmethods=["delete","add_documents"]formethodinmethods:ifnothasattr(destination,method):raiseValueError(f"Vectorstore {destination} does not have required method {method}")iftype(destination).delete==VectorStore.delete:# Checking if the vectorstore has overridden the default delete method# implementation which just raises a NotImplementedErrorraiseValueError("Vectorstore has not implemented the delete method")elifisinstance(destination,DocumentIndex):passelse:raiseTypeError(f"Vectorstore should be either a VectorStore or a DocumentIndex. "f"Got {type(destination)}.")ifisinstance(docs_source,BaseLoader):try:doc_iterator=docs_source.lazy_load()exceptNotImplementedError:doc_iterator=iter(docs_source.load())else:doc_iterator=iter(docs_source)source_id_assigner=_get_source_id_assigner(source_id_key)# Mark when the update started.index_start_dt=record_manager.get_time()num_added=0num_skipped=0num_updated=0num_deleted=0fordoc_batchin_batch(batch_size,doc_iterator):hashed_docs=list(_deduplicate_in_order([_HashedDocument.from_document(doc)fordocindoc_batch]))source_ids:Sequence[Optional[str]]=[source_id_assigner(doc)fordocinhashed_docs]ifcleanup=="incremental":# If the cleanup mode is incremental, source ids are required.forsource_id,hashed_docinzip(source_ids,hashed_docs):ifsource_idisNone:raiseValueError("Source ids are required when cleanup mode is incremental. "f"Document that starts with "f"content: {hashed_doc.page_content[:100]} was not assigned "f"as source id.")# source ids cannot be None after for loop above.source_ids=cast(Sequence[str],source_ids)# type: ignore[assignment]exists_batch=record_manager.exists([doc.uidfordocinhashed_docs])# Filter out documents that already exist in the record store.uids=[]docs_to_index=[]uids_to_refresh=[]seen_docs:Set[str]=set()forhashed_doc,doc_existsinzip(hashed_docs,exists_batch):ifdoc_exists:ifforce_update:seen_docs.add(hashed_doc.uid)else:uids_to_refresh.append(hashed_doc.uid)continueuids.append(hashed_doc.uid)docs_to_index.append(hashed_doc.to_document())# Update refresh timestampifuids_to_refresh:record_manager.update(uids_to_refresh,time_at_least=index_start_dt)num_skipped+=len(uids_to_refresh)# Be pessimistic and assume that all vector store write will fail.# First write to vector storeifdocs_to_index:ifisinstance(destination,VectorStore):destination.add_documents(docs_to_index,ids=uids,batch_size=batch_size)elifisinstance(destination,DocumentIndex):destination.upsert(docs_to_index)num_added+=len(docs_to_index)-len(seen_docs)num_updated+=len(seen_docs)# And only then update the record store.# Update ALL records, even if they already exist since we want to refresh# their timestamp.record_manager.update([doc.uidfordocinhashed_docs],group_ids=source_ids,time_at_least=index_start_dt,)# If source IDs are provided, we can do the deletion incrementally!ifcleanup=="incremental":# Get the uids of the documents that were not returned by the loader.# mypy isn't good enough to determine that source ids cannot be None# here due to a check that's happening above, so we check again.forsource_idinsource_ids:ifsource_idisNone:raiseAssertionError("Source ids cannot be None here.")_source_ids=cast(Sequence[str],source_ids)uids_to_delete=record_manager.list_keys(group_ids=_source_ids,before=index_start_dt)ifuids_to_delete:# Then delete from vector store.destination.delete(uids_to_delete)# First delete from record store.record_manager.delete_keys(uids_to_delete)num_deleted+=len(uids_to_delete)ifcleanup=="full":whileuids_to_delete:=record_manager.list_keys(before=index_start_dt,limit=cleanup_batch_size):# First delete from record store.destination.delete(uids_to_delete)# Then delete from record manager.record_manager.delete_keys(uids_to_delete)num_deleted+=len(uids_to_delete)return{"num_added":num_added,"num_updated":num_updated,"num_skipped":num_skipped,"num_deleted":num_deleted,}
# Define an asynchronous generator functionasyncdef_to_async_iterator(iterator:Iterable[T])->AsyncIterator[T]:"""Convert an iterable to an async iterator."""foriteminiterator:yielditem
[docs]asyncdefaindex(docs_source:Union[BaseLoader,Iterable[Document],AsyncIterator[Document]],record_manager:RecordManager,vector_store:Union[VectorStore,DocumentIndex],*,batch_size:int=100,cleanup:Literal["incremental","full",None]=None,source_id_key:Union[str,Callable[[Document],str],None]=None,cleanup_batch_size:int=1_000,force_update:bool=False,)->IndexingResult:"""Async index data from the loader into the vector store. Indexing functionality uses a manager to keep track of which documents are in the vector store. This allows us to keep track of which documents were updated, and which documents were deleted, which documents should be skipped. For the time being, documents are indexed using their hashes, and users are not able to specify the uid of the document. IMPORTANT: if auto_cleanup is set to True, the loader should be returning the entire dataset, and not just a subset of the dataset. Otherwise, the auto_cleanup will remove documents that it is not supposed to. Args: docs_source: Data loader or iterable of documents to index. record_manager: Timestamped set to keep track of which documents were updated. vectorstore: Vector store or Document Index to index the documents into batch_size: Batch size to use when indexing. Default is 100. cleanup: How to handle clean up of documents. Default is None. - Incremental: Cleans up all documents that haven't been updated AND that are associated with source ids that were seen during indexing. Clean up is done continuously during indexing helping to minimize the probability of users seeing duplicated content. - Full: Delete all documents that haven to been returned by the loader. Clean up runs after all documents have been indexed. This means that users may see duplicated content during indexing. - None: Do not delete any documents. source_id_key: Optional key that helps identify the original source of the document. Default is None. cleanup_batch_size: Batch size to use when cleaning up documents. Default is 1_000. force_update: Force update documents even if they are present in the record manager. Useful if you are re-indexing with updated embeddings. Default is False. Returns: Indexing result which contains information about how many documents were added, updated, deleted, or skipped. Raises: ValueError: If cleanup mode is not one of 'incremental', 'full' or None ValueError: If cleanup mode is incremental and source_id_key is None. ValueError: If vectorstore does not have "adelete" and "aadd_documents" required methods. ValueError: If source_id_key is not None, but is not a string or callable. """ifcleanupnotin{"incremental","full",None}:raiseValueError(f"cleanup should be one of 'incremental', 'full' or None. "f"Got {cleanup}.")ifcleanup=="incremental"andsource_id_keyisNone:raiseValueError("Source id key is required when cleanup mode is incremental.")destination=vector_store# Renaming internally for clarity# If it's a vectorstore, let's check if it has the required methods.ifisinstance(destination,VectorStore):# Check that the Vectorstore has required methods implemented# Check that the Vectorstore has required methods implementedmethods=["adelete","aadd_documents"]formethodinmethods:ifnothasattr(destination,method):raiseValueError(f"Vectorstore {destination} does not have required method {method}")iftype(destination).adelete==VectorStore.adelete:# Checking if the vectorstore has overridden the default delete method# implementation which just raises a NotImplementedErrorraiseValueError("Vectorstore has not implemented the delete method")elifisinstance(destination,DocumentIndex):passelse:raiseTypeError(f"Vectorstore should be either a VectorStore or a DocumentIndex. "f"Got {type(destination)}.")async_doc_iterator:AsyncIterator[Document]ifisinstance(docs_source,BaseLoader):try:async_doc_iterator=docs_source.alazy_load()exceptNotImplementedError:# Exception triggered when neither lazy_load nor alazy_load are implemented.# * The default implementation of alazy_load uses lazy_load.# * The default implementation of lazy_load raises NotImplementedError.# In such a case, we use the load method and convert it to an async# iterator.async_doc_iterator=_to_async_iterator(docs_source.load())else:ifhasattr(docs_source,"__aiter__"):async_doc_iterator=docs_source# type: ignore[assignment]else:async_doc_iterator=_to_async_iterator(docs_source)source_id_assigner=_get_source_id_assigner(source_id_key)# Mark when the update started.index_start_dt=awaitrecord_manager.aget_time()num_added=0num_skipped=0num_updated=0num_deleted=0asyncfordoc_batchin_abatch(batch_size,async_doc_iterator):hashed_docs=list(_deduplicate_in_order([_HashedDocument.from_document(doc)fordocindoc_batch]))source_ids:Sequence[Optional[str]]=[source_id_assigner(doc)fordocinhashed_docs]ifcleanup=="incremental":# If the cleanup mode is incremental, source ids are required.forsource_id,hashed_docinzip(source_ids,hashed_docs):ifsource_idisNone:raiseValueError("Source ids are required when cleanup mode is incremental. "f"Document that starts with "f"content: {hashed_doc.page_content[:100]} was not assigned "f"as source id.")# source ids cannot be None after for loop above.source_ids=cast(Sequence[str],source_ids)exists_batch=awaitrecord_manager.aexists([doc.uidfordocinhashed_docs])# Filter out documents that already exist in the record store.uids:list[str]=[]docs_to_index:list[Document]=[]uids_to_refresh=[]seen_docs:Set[str]=set()forhashed_doc,doc_existsinzip(hashed_docs,exists_batch):ifdoc_exists:ifforce_update:seen_docs.add(hashed_doc.uid)else:uids_to_refresh.append(hashed_doc.uid)continueuids.append(hashed_doc.uid)docs_to_index.append(hashed_doc.to_document())ifuids_to_refresh:# Must be updated to refresh timestamp.awaitrecord_manager.aupdate(uids_to_refresh,time_at_least=index_start_dt)num_skipped+=len(uids_to_refresh)# Be pessimistic and assume that all vector store write will fail.# First write to vector storeifdocs_to_index:ifisinstance(destination,VectorStore):awaitdestination.aadd_documents(docs_to_index,ids=uids,batch_size=batch_size)elifisinstance(destination,DocumentIndex):awaitdestination.aupsert(docs_to_index)num_added+=len(docs_to_index)-len(seen_docs)num_updated+=len(seen_docs)# And only then update the record store.# Update ALL records, even if they already exist since we want to refresh# their timestamp.awaitrecord_manager.aupdate([doc.uidfordocinhashed_docs],group_ids=source_ids,time_at_least=index_start_dt,)# If source IDs are provided, we can do the deletion incrementally!ifcleanup=="incremental":# Get the uids of the documents that were not returned by the loader.# mypy isn't good enough to determine that source ids cannot be None# here due to a check that's happening above, so we check again.forsource_idinsource_ids:ifsource_idisNone:raiseAssertionError("Source ids cannot be None here.")_source_ids=cast(Sequence[str],source_ids)uids_to_delete=awaitrecord_manager.alist_keys(group_ids=_source_ids,before=index_start_dt)ifuids_to_delete:# Then delete from vector store.awaitdestination.adelete(uids_to_delete)# First delete from record store.awaitrecord_manager.adelete_keys(uids_to_delete)num_deleted+=len(uids_to_delete)ifcleanup=="full":whileuids_to_delete:=awaitrecord_manager.alist_keys(before=index_start_dt,limit=cleanup_batch_size):# First delete from record store.awaitdestination.adelete(uids_to_delete)# Then delete from record manager.awaitrecord_manager.adelete_keys(uids_to_delete)num_deleted+=len(uids_to_delete)return{"num_added":num_added,"num_updated":num_updated,"num_skipped":num_skipped,"num_deleted":num_deleted,}